contigs meaning in English
邻接片段
序列重叠群
Examples
- It suggested that 1118 contigs were homologous to the genes identified previously by blast from the internet while other 533 contigs matched unknown protein coding regions ( in which 101 had been found before in other organisms and 432 were completely novel )
网上blast比对显示其中1118个序列与已知基因相似，其余533个为未知功能的开放阅读框(其中101个已在其它生物中发现， 423个为新发现的序列) 。 - When using the nuclear acid sequence and the predicted amino acid sequence of scghr to blast the fugu genome , we found that there were two contigs which shared the most similarity with scghr . therefore we realized there maybe were two ghrs encoded by different genes in teleosts . then , by means of nuclear acid sequence joining , orf of fghr1 and fghr2 were predicted from fugu genomic sequences using cohoghr isf1 , cohoghr isf2 , chghr and other related ghr amino acid sequence available at ncbi database
当利用南方鲇ghr的核苷酸、氨基酸序列blast东方?的基因组时，发现有两个contig与其氨基酸序列非常相似，因此意识到鱼类可能存在两种不同基因编码的ghr 。随后主要利用已经克隆得到的cohoghrisf1 、 cohoghrisf2 、 chghr以及其他鱼类ghr核苷酸和氨基酸序列blast东方纯的基因组，采用序列拼接的方法从东方?基因组中分离出两种不同基因编码的fghr1和fghr2 (本研究把和传统ghr相似的叫做ghr1 ，把另外一种叫做ghr2 ) 。 - In summary , we constructed and characterized a bac library of silky , a unique chinese native breed of chicken . the library has high genome coverage ( 13 - fold ) , chimerism ( 6 % ) and overlapped bacs , which made it a valuable resource to complete chicken physical map , study functional genes and construct bac contigs . we analyzed the whole genomic sequence and snps of tyrp1 and found that silky tyrp1 is different with other breeds both in microsatellite and transcription regulation site
中国农业人学博卜学位论文摘要本研究构建了中国特有鸡种丝羽鸟骨鸡基因组bac文库并进行了文库质量鉴定，它所具有的13倍高基因组覆盖率、 6 %的嵌合率和部分重叠的克隆使其成为完善鸡的基因组图谱、研究基因功能和构建bac重叠群的优质资源。 - A web - based blast is also constructed to facilitate the process . and the contigs and ests sequences are formatted as subject database . by similarity search , about 442 estss were found possibly encoding immune related proteins , such as lysozyme , lectin , serine protease , serpin , thioredoxin , sod and so on
为了方便相似性比对，在由四台pc机并行组成的机群( pc - cluster )上将blast程序和interproscan程序本地化，并且将contig和ests序列文件做成blast程序中的序列库文件以供搜索。